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  5. Solyc04g005900

Solyc04g005900


Description : F-box family protein (AHRD V3.3 *** B9HWR1_POPTR)


Gene families : OG_42_0000312 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g005900
Cluster HCCA clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g16700 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os08g36010 No alias OsFBX295 - F-box domain containing protein, expressed 0.02 Orthogroups_2024-Update
Solyc06g005050 No alias F-box family protein (AHRD V3.3 *** B9HWR1_POPTR) 0.03 Orthogroups_2024-Update
Sopen08g023490 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 9 42
IPR006566 FBD 348 385
No external refs found!