Solyc04g007550


Description : ATP synthase subunit beta (AHRD V3.3 *** W8SRJ3_TOBAC)


Gene families : OG_42_0000756 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000756_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g007550
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G033050.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G028800.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Sopen10g009220 No alias ATP synthase alpha/beta chain, C terminal domain 0.03 Orthogroups_2024-Update
Sopen12g014980 No alias ATP synthase alpha/beta chain, C terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006754 ATP biosynthetic process IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
BP GO:0046034 ATP metabolic process IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 229 450
IPR020971 ATP_synth_F1_beta_su 1 51
IPR004100 ATPase_F1/V1/A1_a/bsu_N 94 160
No external refs found!