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  4. Sequence
  5. Solyc04g007580

Solyc04g007580


Description : LOW QUALITY:DUF4228 domain protein (AHRD V3.3 *** G7IAV0_MEDTR)


Gene families : OG_42_0001139 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g007580
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
A4A49_09894 No alias hypothetical protein 0.05 Orthogroups_2024-Update
At5g17350 No alias Uncharacterized protein At5g17350... 0.03 Orthogroups_2024-Update
Glyma.19G001400 No alias Function unknown 0.03 Orthogroups_2024-Update
MA_121280g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_21964g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_24094g0010 No alias (at3g03280 : 93.6) unknown protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
MA_495117g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00055830-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025322 DUF4228_plant 1 158
No external refs found!