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  5. Solyc04g008900

Solyc04g008900


Description : transmembrane protein, putative (DUF247) (AHRD V3.3 *** AT3G50170.1)


Gene families : OG_42_0000095 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g008900
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
A4A49_18948 No alias upf0481 protein 0.04 Orthogroups_2024-Update
At3g47210 No alias AT3g47210/F13I12_260 [Source:UniProtKB/TrEMBL;Acc:Q9SD52] 0.04 Orthogroups_2024-Update
At3g50150 No alias Transmembrane protein, putative (DUF247)... 0.04 Orthogroups_2024-Update
Bradi3g41560 No alias Plant protein of unknown function (DUF247) 0.04 Orthogroups_2024-Update
Bradi3g41570 No alias Plant protein of unknown function (DUF247) 0.06 Orthogroups_2024-Update
Glyma.02G271000 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Glyma.07G147200 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Glyma.16G161000 No alias Plant protein of unknown function (DUF247) 0.04 Orthogroups_2024-Update
HORVU4Hr1G011040.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os09g12840 No alias plant protein of unknown function domain containing... 0.03 Orthogroups_2024-Update
LOC_Os11g33394 No alias plant protein of unknown function domain containing... 0.02 Orthogroups_2024-Update
LOC_Os12g32880 No alias plant protein of unknown function domain containing... 0.03 Orthogroups_2024-Update
MA_109716g0010 No alias (at3g50170 : 195.0) Plant protein of unknown function... 0.03 Orthogroups_2024-Update
PSME_00029264-RA No alias (at3g50130 : 92.4) Plant protein of unknown function... 0.03 Orthogroups_2024-Update
Potri.001G017900 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.001G071300 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.003G181600 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.008G106100 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.016G039800 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.T012600 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.T087400 No alias Function unknown 0.03 Orthogroups_2024-Update
Seita.1G014800.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.004G112400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G139600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g057260 No alias transmembrane protein, putative (DUF247) (AHRD V3.3 *-*... 0.04 Orthogroups_2024-Update
Solyc10g079530 No alias LOW QUALITY:transmembrane protein, putative (DUF247)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004158 DUF247_pln 45 422
No external refs found!