1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g008970

Solyc04g008970


Description : GRAM domain-containing protein / ABA-responsive protein-related (AHRD V3.3 *** A0A061E267_THECC)


Gene families : OG_42_0000247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g008970
Cluster HCCA clusters: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G046952 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.02 Orthogroups_2024-Update
LOC_Os10g34730 No alias GEM, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434405g0010 No alias (at5g13200 : 120.0) GRAM domain family protein; CONTAINS... 0.02 Orthogroups_2024-Update
PSME_00024379-RA No alias (at5g13200 : 294.0) GRAM domain family protein; CONTAINS... 0.03 Orthogroups_2024-Update
Potri.004G068000 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 Orthogroups_2024-Update
Potri.005G159100 No alias FH interacting protein 1 0.03 Orthogroups_2024-Update
Sopen04g004150 No alias GRAM domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
MF GO:0098519 nucleotide phosphatase activity, acting on free nucleotides IEP Predicted GO
InterPro domains Description Start Stop
IPR004182 GRAM 134 252
No external refs found!