- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : PsbB mRNA maturation factor Mbb1 (AHRD V3.3 *** W9RTZ1_9ROSA)
Gene families : OG_42_0005803 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005803_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc04g009020 | |
| Cluster | HCCA clusters: Cluster_194 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_20351 | No alias | protein high chlorophyll fluorescent 107 | 0.04 | Orthogroups_2024-Update | |
| LOC_Os03g19560 | No alias | tetratricopeptide repeat domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
| Potri.010G145000 | No alias | high chlorophyll fluorescent 107 | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G394800.1 | No alias | plastidial transcript stability factor *(HCF107) | 0.03 | Orthogroups_2024-Update | |
| Sopen04g004200 | No alias | Tetratricopeptide repeat | 0.11 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | Predicted GO |
| BP | GO:0001101 | response to acid chemical | IEP | Predicted GO |
| BP | GO:0001932 | regulation of protein phosphorylation | IEP | Predicted GO |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Predicted GO |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Predicted GO |
| MF | GO:0004470 | malic enzyme activity | IEP | Predicted GO |
| MF | GO:0004471 | malate dehydrogenase (decarboxylating) (NAD+) activity | IEP | Predicted GO |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Predicted GO |
| CC | GO:0005779 | integral component of peroxisomal membrane | IEP | Predicted GO |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Predicted GO |
| BP | GO:0006101 | citrate metabolic process | IEP | Predicted GO |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0006541 | glutamine metabolic process | IEP | Predicted GO |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Predicted GO |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Predicted GO |
| BP | GO:0007165 | signal transduction | IEP | Predicted GO |
| BP | GO:0008150 | biological_process | IEP | Predicted GO |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Predicted GO |
| BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Predicted GO |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0009314 | response to radiation | IEP | Predicted GO |
| BP | GO:0009415 | response to water | IEP | Predicted GO |
| BP | GO:0009416 | response to light stimulus | IEP | Predicted GO |
| BP | GO:0009581 | detection of external stimulus | IEP | Predicted GO |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Predicted GO |
| BP | GO:0009583 | detection of light stimulus | IEP | Predicted GO |
| BP | GO:0009584 | detection of visible light | IEP | Predicted GO |
| BP | GO:0009605 | response to external stimulus | IEP | Predicted GO |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| BP | GO:0010035 | response to inorganic substance | IEP | Predicted GO |
| BP | GO:0015672 | monovalent inorganic cation transport | IEP | Predicted GO |
| BP | GO:0015977 | carbon fixation | IEP | Predicted GO |
| BP | GO:0016114 | terpenoid biosynthetic process | IEP | Predicted GO |
| MF | GO:0016211 | ammonia ligase activity | IEP | Predicted GO |
| BP | GO:0016559 | peroxisome fission | IEP | Predicted GO |
| MF | GO:0016615 | malate dehydrogenase activity | IEP | Predicted GO |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | Predicted GO |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
| MF | GO:0016829 | lyase activity | IEP | Predicted GO |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Predicted GO |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Predicted GO |
| BP | GO:0016999 | antibiotic metabolic process | IEP | Predicted GO |
| BP | GO:0017006 | protein-tetrapyrrole linkage | IEP | Predicted GO |
| BP | GO:0017007 | protein-bilin linkage | IEP | Predicted GO |
| BP | GO:0017009 | protein-phycocyanobilin linkage | IEP | Predicted GO |
| BP | GO:0017144 | drug metabolic process | IEP | Predicted GO |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Predicted GO |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Predicted GO |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Predicted GO |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Predicted GO |
| MF | GO:0019900 | kinase binding | IEP | Predicted GO |
| MF | GO:0019901 | protein kinase binding | IEP | Predicted GO |
| CC | GO:0031231 | intrinsic component of peroxisomal membrane | IEP | Predicted GO |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Predicted GO |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Predicted GO |
| BP | GO:0031399 | regulation of protein modification process | IEP | Predicted GO |
| BP | GO:0034220 | ion transmembrane transport | IEP | Predicted GO |
| BP | GO:0042325 | regulation of phosphorylation | IEP | Predicted GO |
| BP | GO:0043549 | regulation of kinase activity | IEP | Predicted GO |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Predicted GO |
| CC | GO:0044438 | microbody part | IEP | Predicted GO |
| CC | GO:0044439 | peroxisomal part | IEP | Predicted GO |
| BP | GO:0045859 | regulation of protein kinase activity | IEP | Predicted GO |
| BP | GO:0046034 | ATP metabolic process | IEP | Predicted GO |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Predicted GO |
| MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEP | Predicted GO |
| MF | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism | IEP | Predicted GO |
| BP | GO:0048285 | organelle fission | IEP | Predicted GO |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0051338 | regulation of transferase activity | IEP | Predicted GO |
| BP | GO:0051606 | detection of stimulus | IEP | Predicted GO |
| MF | GO:0052592 | oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor | IEP | Predicted GO |
| BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | Predicted GO |
| BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Predicted GO |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0098655 | cation transmembrane transport | IEP | Predicted GO |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Predicted GO |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Predicted GO |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Predicted GO |
| BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |