1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g009120

Solyc04g009120


Description : Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC)


Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g009120
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
A4A49_41267 No alias disease resistance protein rpp13 0.03 Orthogroups_2024-Update
Glyma.18G283166 No alias Disease resistance protein (CC-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Seita.8G064900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g009150 No alias Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC) 0.03 Orthogroups_2024-Update
Sopen04g004250 No alias NB-ARC domain 0.03 Orthogroups_2024-Update
Sopen08g001480 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
CC GO:0005811 lipid droplet IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
CC GO:0012511 monolayer-surrounded lipid storage body IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 178 445
No external refs found!