Solyc04g009130

Description : Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC)

Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc04g009130
Cluster	HCCA clusters: Cluster_297

Target	Alias	Description	ECC score	Gene Family Method
At3g46710	No alias	Putative disease resistance RPP13-like protein 2...	0.03	Orthogroups_2024-Update
Bradi2g39847	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Bradi5g17527	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Glyma.18G084400	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.18G093600	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
HORVU7Hr1G008170.3	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os02g09790	No alias	disease resistance protein RPM1, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g21400	No alias	disease resistance protein RPM1, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g12320	No alias	disease resistance protein RPM1, putative, expressed	0.02	Orthogroups_2024-Update
Potri.003G099000	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.003G149800	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	Orthogroups_2024-Update
Seita.8G088300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sopen08g001480	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predicted GO
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	173	450

External Links

No external refs found!