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  5. Solyc04g009340

Solyc04g009340


Description : RING/U-box superfamily protein (AHRD V3.3 *** AT3G19895.1)


Gene families : OG_42_0002605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002605_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g009340
Cluster HCCA clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
Glyma.12G028900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G111680.4 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0004871 obsolete signal transducer activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005834 heterotrimeric G-protein complex IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
CC GO:1905360 GTPase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!