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  5. Solyc04g011630

Solyc04g011630


Description : Transcription factor GRAS (AHRD V3.3 *-* A0A103Y9C7_CYNCS)


Gene families : OG_42_0000237 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g011630
Cluster HCCA clusters: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
At1g07530 No alias AT1G07530 protein [Source:UniProtKB/TrEMBL;Acc:B9DFJ3] 0.03 Orthogroups_2024-Update
Bradi4g03867 No alias SCARECROW-like 14 0.02 Orthogroups_2024-Update
Bradi4g09239 No alias GRAS family transcription factor 0.04 Orthogroups_2024-Update
Brara.I05354.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G028608 No alias GRAS family transcription factor 0.03 Orthogroups_2024-Update
Glyma.18G182500 No alias GRAS family transcription factor 0.03 Orthogroups_2024-Update
Seita.8G250000.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G301800.1 No alias GRAS-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.005G229400.1 No alias GRAS-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.005G229900.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Sopen04g005810 No alias GRAS domain family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 3 167
No external refs found!