Solyc04g012050

Description : Ethylene-responsive transcription factor (AHRD V3.3 *-* W9RA19_9ROSA)

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc04g012050
Cluster	HCCA clusters: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
69413	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
A4A49_03202	No alias	ethylene-responsive transcription factor erf053	0.02	Orthogroups_2024-Update
A4A49_03629	No alias	dehydration-responsive element-binding protein 3	0.02	Orthogroups_2024-Update
A4A49_15668	No alias	ethylene-responsive transcription factor rap2-12	0.03	Orthogroups_2024-Update
A4A49_17723	No alias	ethylene-responsive transcription factor 1	0.03	Orthogroups_2024-Update
A4A49_21042	No alias	ethylene-responsive transcription factor 4	0.03	Orthogroups_2024-Update
A4A49_35180	No alias	ethylene-responsive transcription factor 1b	0.03	Orthogroups_2024-Update
A4A49_38622	No alias	dehydration-responsive element-binding protein 3	0.02	Orthogroups_2024-Update
A4A49_40581	No alias	ethylene-responsive transcription factor erf106	0.02	Orthogroups_2024-Update
A4A49_42272	No alias	ethylene-responsive transcription factor 4	0.02	Orthogroups_2024-Update
At2g40220	No alias	Ethylene-responsive transcription factor ABI4...	0.03	Orthogroups_2024-Update
At4g39780	No alias	Ethylene-responsive transcription factor ERF060...	0.03	Orthogroups_2024-Update
Bradi1g38110	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g24000	No alias	Integrase-type DNA-binding superfamily protein	0.06	Orthogroups_2024-Update
Bradi5g17480	No alias	ethylene responsive element binding factor 1	0.02	Orthogroups_2024-Update
Bradi5g17620	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi5g17640	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.B00253.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.D01564.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.G03123.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Brara.H02380.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.03	Orthogroups_2024-Update
Brara.I01326.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
Brara.I03088.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.K00687.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G018398	No alias	related to AP2 12	0.02	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G066158	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
GRMZM2G135452	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G169382	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.03G112700	No alias	ethylene-responsive element binding factor 13	0.02	Orthogroups_2024-Update
Glyma.04G217400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G092800	No alias	cooperatively regulated by ethylene and jasmonate 1	0.03	Orthogroups_2024-Update
Glyma.05G214400	No alias	cytokinin response factor 2	0.04	Orthogroups_2024-Update
Glyma.06G148400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G110000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G250100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.16G012600	No alias	related to AP2 2	0.03	Orthogroups_2024-Update
Glyma.18G252300	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.19G163900	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
HORVU1Hr1G055710.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
HORVU5Hr1G080340.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU7Hr1G088790.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
LOC_Os02g34260	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g51670	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g60120	No alias	AP2 domain containing protein, expressed	0.04	Orthogroups_2024-Update
LOC_Os06g08340	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g12510	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_10274g0010	No alias	(at5g13330 : 108.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
MA_1037g0020	No alias	(at1g74930 : 134.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_10433310g0010	No alias	(at5g11590 : 108.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
MA_12171g0010	No alias	(at5g21960 : 119.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_134453g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_4032g0010	No alias	(q9sxs8\|erf3_tobac : 85.1) Ethylene-responsive...	0.04	Orthogroups_2024-Update
MA_40338g0010	No alias	(at1g21910 : 84.7) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_5805979g0010	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_65190g0010	No alias	(at5g19790 : 91.3) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_65877g0010	No alias	(at3g16280 : 101.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.001G163700	No alias	related to AP2 12	0.02	Orthogroups_2024-Update
Potri.001G315300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.003G080600	No alias	ethylene responsive element binding factor 6	0.02	Orthogroups_2024-Update
Potri.004G187001	No alias	C-repeat/DRE binding factor 2	0.03	Orthogroups_2024-Update
Potri.005G195000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.008G071100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.011G061700	No alias	ethylene response factor 1	0.04	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.018G021900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.018G085700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.019G075600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Seita.2G138400.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.2G276200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.3G281000.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
Seita.6G023800.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Seita.7G080300.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Seita.7G232100.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Seita.7G262800.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Seita.9G516500.1	No alias	subgroup ERF-VII transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G296300.1	No alias	subgroup ERF-IX transcription factor	0.05	Orthogroups_2024-Update
Sobic.001G473900.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
Sobic.002G115400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G168000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G170100.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G170800.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Solyc01g009440	No alias	C-repeat binding factor 1 (AHRD V3.3 *** A0A077B5X4_9ROSI)	0.03	Orthogroups_2024-Update
Solyc01g090320	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.03	Orthogroups_2024-Update
Solyc03g093530	No alias	ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc04g051360	No alias	Ethylene Response Factor D.1	0.03	Orthogroups_2024-Update
Solyc04g071770	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.05	Orthogroups_2024-Update
Solyc06g035700	No alias	Dehydration responsive element binding transcription...	0.03	Orthogroups_2024-Update
Solyc07g053740	No alias	Ethylene Response Factor F.4	0.03	Orthogroups_2024-Update
Solyc12g056980	No alias	Ethylene-responsive element binding-factor (AHRD V3.3...	0.03	Orthogroups_2024-Update
Sopen01g039250	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen04g006680	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen04g022770	No alias	Reverse transcriptase (RNA-dependent DNA polymerase)	0.03	Orthogroups_2024-Update
Sopen04g029080	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen12g001920	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0019899	enzyme binding	IEP	Predicted GO
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predicted GO
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	156	205

External Links

No external refs found!

Solyc04g012050

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation