Solyc04g016000

Description : SolycHsfB3a

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc04g016000
Cluster	HCCA clusters: Cluster_6

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g38140	No alias	heat shock transcription factor C1	0.03	Orthogroups_2024-Update
Bradi4g32130	No alias	heat shock factor 4	0.03	Orthogroups_2024-Update
Brara.B02421.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H00433.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Glyma.19G159500	No alias	heat shock transcription factor A6B	0.02	Orthogroups_2024-Update
HORVU7Hr1G119990.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.2G282400.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.4G238100.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Solyc09g082670	No alias	SolycHsfA6a	0.03	Orthogroups_2024-Update
Solyc11g064990	No alias	SolycHsfB4b	0.04	Orthogroups_2024-Update
Sopen04g032370	No alias	HSF-type DNA-binding	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004177	aminopeptidase activity	IEP	Predicted GO
MF	GO:0004616	phosphogluconate dehydrogenase (decarboxylating) activity	IEP	Predicted GO
CC	GO:0005694	chromosome	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006098	pentose-phosphate shunt	IEP	Predicted GO
BP	GO:0006739	NADP metabolic process	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	29	118

External Links

No external refs found!

Solyc04g016000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation