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  5. Solyc04g016170

Solyc04g016170


Description : LOW QUALITY:Photosystem I P700 chlorophyll a apoprotein A2 (AHRD V3.3 *-* PSAB_SOLTU)


Gene families : OG_42_0000633 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000633_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g016170
Cluster HCCA clusters: Cluster_282

Target Alias Description ECC score Gene Family Method Actions
236842 No alias Photosystem I, PsaA/PsaB protein 0.02 Orthogroups_2024-Update
Bradi1g39223 No alias Photosystem I, PsaA/PsaB protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G037020.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Mp1g07160.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.02 Orthogroups_2024-Update
PSME_00007865-RA No alias (p41640|psab_pinth : 787.0) Photosystem I P700... 0.04 Orthogroups_2024-Update
PSME_00023812-RA No alias (p58386|psab_wheat : 347.0) Photosystem I P700... 0.04 Orthogroups_2024-Update
Pp1s143_15V6 No alias psi p700 apoprotein a2 0.03 Orthogroups_2024-Update
Seita.J011100.1 No alias apoprotein PsaA of PS-I complex 0.03 Orthogroups_2024-Update
Seita.J019800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G120266.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen12g014090 No alias Photosystem I psaA/psaB protein 0.06 Orthogroups_2024-Update
Sopen12g014100 No alias Photosystem I psaA/psaB protein 0.05 Orthogroups_2024-Update
Sopen12g014140 No alias Photosystem I psaA/psaB protein 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009579 thylakoid IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 3 75
No external refs found!