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  5. Solyc04g016440

Solyc04g016440


Description : Transmembrane proteins 14C (AHRD V3.3 *** AT3G57280.1)


Gene families : OG_42_0000728 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000728_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc04g016440
Cluster HCCA clusters: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Bradi1g26110 No alias Transmembrane proteins 14C 0.04 Orthogroups_2024-Update
Brara.E02135.1 No alias fatty acid transporter *(FAX) & fatty acid export protein *(FAX) 0.04 Orthogroups_2024-Update
Glyma.17G043500 No alias Transmembrane proteins 14C 0.03 Orthogroups_2024-Update
HORVU2Hr1G081780.2 No alias fatty acid export protein *(FAX) 0.03 Orthogroups_2024-Update
Sopen10g002260 No alias Transmembrane proteins 14C 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005349 TMEM14 23 121
No external refs found!