Solyc04g017740


Description : LOW QUALITY:pyridoxal-phosphate-dependent serine hydroxymethyltransferase, putative (DUF632) (AHRD V3.3 --* AT3G51290.3)


Gene families : OG_42_0012253 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0012253_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g017740
Cluster HCCA clusters: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Potri.006G044300 No alias Function unknown 0.02 Orthogroups_2024-Update
Sopen04g008930 No alias hypothetical protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!