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  5. Solyc04g025210

Solyc04g025210


Description : DUF668 family protein (AHRD V3.3 *** A0A072VPK0_MEDTR)


Gene families : OG_42_0000845 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000845_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g025210
Cluster HCCA clusters: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Brara.I02429.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G057006 No alias Protein of unknown function (DUF668) 0.03 Orthogroups_2024-Update
Glyma.04G023800 No alias Protein of unknown function (DUF668) 0.03 Orthogroups_2024-Update
Solyc11g017000 No alias DUF668 family protein (AHRD V3.3 *** A0A072VPK0_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR021864 DUF3475 109 165
IPR007700 DUF668 329 413
No external refs found!