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  5. Solyc04g028580

Solyc04g028580


Description : Lysine-specific demethylase (AHRD V3.3 *-* A0A199W5D5_ANACO)


Gene families : OG_42_0001752 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001752_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g028580
Cluster HCCA clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Sopen03g030710 No alias JmjC domain, hydroxylase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
InterPro domains Description Start Stop
IPR003347 JmjC_dom 371 423
IPR003347 JmjC_dom 269 330
IPR003349 JmjN 15 48
No external refs found!