Solyc04g039990

Description : NBS-LRR disease resistance protein (AHRD V3.3 *** C6FF78_SOYBN)

Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc04g039990
Cluster	HCCA clusters: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
Glyma.19G134200	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G126380.4	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU2Hr1G126510.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os11g10770	No alias	disease resistance protein RGA3, putative, expressed	0.02	Orthogroups_2024-Update
Potri.001G261300	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.003G200120	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.005G007001	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Seita.6G232200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.8G236600.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.008G101500.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc03g006740	No alias	Disease resistance protein (AHRD V3.3 - Q1RU52_MEDTR)	0.04	Orthogroups_2024-Update
Sopen08g024300	No alias	NB-ARC domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	Predicted GO
MF	GO:0005516	calmodulin binding	IEP	Predicted GO
MF	GO:0046983	protein dimerization activity	IEP	Predicted GO
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	238	364
IPR002182	NB-ARC	378	479

External Links

No external refs found!