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  5. Solyc04g051800

Solyc04g051800


Description : ABC transporter family protein (AHRD V3.3 *** AT5G09930.1)


Gene families : OG_42_0004906 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004906_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g051800
Cluster HCCA clusters: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
A4A49_34014 No alias abc transporter f family member 5 0.05 Orthogroups_2024-Update
At5g64840 No alias GCN5 [Source:UniProtKB/TrEMBL;Acc:A0A178UAA3] 0.05 Orthogroups_2024-Update
Bradi4g14020 No alias general control non-repressible 5 0.04 Orthogroups_2024-Update
Brara.B03917.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Cre08.g372250 No alias general control non-repressible 5 0.01 Orthogroups_2024-Update
GRMZM2G105570 No alias general control non-repressible 5 0.03 Orthogroups_2024-Update
Glyma.04G218900 No alias general control non-repressible 5 0.07 Orthogroups_2024-Update
Glyma.06G146900 No alias general control non-repressible 5 0.04 Orthogroups_2024-Update
LOC_Os11g39020 No alias ABC transporter, ATP-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g11090.1 No alias ABC transporter F family member 5 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Potri.007G080600 No alias general control non-repressible 5 0.03 Orthogroups_2024-Update
Pp1s125_77V6 No alias abc transporter family protein 0.02 Orthogroups_2024-Update
Seita.8G181700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen04g023150 No alias ABC transporter 0.18 Orthogroups_2024-Update
evm.model.contig_2122.16 No alias (at5g09930 : 522.0) member of GCN subfamily; GENERAL... 0.02 Orthogroups_2024-Update
evm.model.contig_3460.2 No alias (at5g09930 : 143.0) member of GCN subfamily; GENERAL... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006163 purine nucleotide metabolic process IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
BP GO:0009150 purine ribonucleotide metabolic process IEP Predicted GO
BP GO:0009259 ribonucleotide metabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
BP GO:0019693 ribose phosphate metabolic process IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070402 NADPH binding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0072521 purine-containing compound metabolic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 444 575
IPR003439 ABC_transporter-like 116 291
IPR032781 ABC_tran_Xtn 330 417
No external refs found!