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  5. Solyc04g054190

Solyc04g054190


Description : ABC1 protein (AHRD V3.3 *** D2XP29_MAIZE)


Gene families : OG_42_0002334 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g054190
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
78366 No alias ABC2 homolog 13 0.04 Orthogroups_2024-Update
A4A49_25185 No alias putative aarf domain-containing protein kinase, chloroplastic 0.06 Orthogroups_2024-Update
At3g07700 No alias Protein kinase superfamily protein... 0.04 Orthogroups_2024-Update
At5g64940 No alias Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic... 0.08 Orthogroups_2024-Update
Bradi1g02770 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Brara.E03181.1 No alias ABC1 atypical protein kinase 0.05 Orthogroups_2024-Update
Brara.F02367.1 No alias ABC1 atypical protein kinase 0.03 Orthogroups_2024-Update
Cre08.g369150 No alias Protein kinase superfamily protein 0.01 Orthogroups_2024-Update
Cre13.g570350 No alias ABC2 homolog 13 0.02 Orthogroups_2024-Update
GRMZM2G040511 No alias ABC2 homolog 13 0.03 Orthogroups_2024-Update
GRMZM5G845129 No alias Protein kinase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G220200 No alias ABC2 homolog 13 0.07 Orthogroups_2024-Update
Glyma.06G145700 No alias ABC2 homolog 13 0.03 Orthogroups_2024-Update
Glyma.08G140900 No alias ABC2 homolog 13 0.05 Orthogroups_2024-Update
Glyma.13G007200 No alias Protein kinase superfamily protein 0.08 Orthogroups_2024-Update
Kfl00097_0230 kfl00097_0230_v1.1 (at5g64940 : 830.0) Encodes a member of ATH subfamily of... 0.02 Orthogroups_2024-Update
LOC_Os02g36570 No alias ABC1 family domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g07660 No alias ELMO/CED-12 family protein, putative, expressed 0.05 Orthogroups_2024-Update
Mp1g20880.1 No alias protein kinase (ABC1) 0.03 Orthogroups_2024-Update
Mp8g04680.1 No alias protein kinase (ABC1) 0.02 Orthogroups_2024-Update
Pp1s83_45V6 No alias abc transporter-like 0.04 Orthogroups_2024-Update
Seita.2G153300.1 No alias ABC1 atypical protein kinase 0.03 Orthogroups_2024-Update
Sobic.001G280100.1 No alias ABC1 atypical protein kinase 0.04 Orthogroups_2024-Update
Sobic.004G189800.1 No alias ABC1 atypical protein kinase 0.05 Orthogroups_2024-Update
Sopen04g023660 No alias ABC1 family 0.13 Orthogroups_2024-Update
Sopen07g023960 No alias ABC1 family 0.05 Orthogroups_2024-Update
evm.model.contig_4440.4 No alias (at3g07700 : 461.0) Protein kinase superfamily protein;... 0.02 Orthogroups_2024-Update
evm.model.tig00000459.54 No alias (at3g07700 : 470.0) Protein kinase superfamily protein;... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004147 UbiB_dom 271 391
No external refs found!