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  5. Solyc04g054380

Solyc04g054380


Description : Terpene synthase (AHRD V3.3 *** G5CV47_SOLLC)


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g054380
Cluster HCCA clusters: Cluster_309

Target Alias Description ECC score Gene Family Method Actions
A4A49_06164 No alias germacrene c synthase 0.04 Orthogroups_2024-Update
At5g48110 No alias Terpenoid cyclases/Protein prenyltransferases... 0.02 Orthogroups_2024-Update
HORVU2Hr1G023900.1 No alias EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Potri.007G074400 No alias terpene synthase 21 0.03 Orthogroups_2024-Update
Potri.T000400 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
Solyc01g101180 No alias viridiflorene synthase 0.05 Orthogroups_2024-Update
Solyc01g101210 No alias viridiflorene synthase 0.03 Orthogroups_2024-Update
Solyc07g052120 No alias Sesquiterpene synthase (AHRD V3.3 *-* G8H5N2_SOLHA) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 25 199
IPR005630 Terpene_synthase_metal-bd 230 494
No external refs found!