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  5. Solyc04g054450

Solyc04g054450


Description : Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *** AT2G33170.2)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g054450
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G043300 No alias receptor like protein 33 0.04 Orthogroups_2024-Update
HORVU3Hr1G111090.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G111100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.T113500 No alias receptor like protein 7 0.03 Orthogroups_2024-Update
Seita.6G071200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G103400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen03g022530 No alias Leucine rich repeat N-terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 31 78
IPR001611 Leu-rich_rpt 519 579
IPR001611 Leu-rich_rpt 447 505
IPR001611 Leu-rich_rpt 185 241
IPR001611 Leu-rich_rpt 667 722
IPR001611 Leu-rich_rpt 134 156
IPR001611 Leu-rich_rpt 401 421
IPR001611 Leu-rich_rpt 325 339
IPR001611 Leu-rich_rpt 299 314
No external refs found!