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  5. Solyc04g054870

Solyc04g054870


Description : LOW QUALITY:DNA glycosylase (AHRD V3.3 *-* A0A103YF48_CYNCS)


Gene families : OG_42_0001291 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g054870
Cluster HCCA clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G073540.40 No alias methylcytosine-specific DNA glycosylase *(ROS1) &... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!