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  5. Solyc04g055080

Solyc04g055080


Description : Major facilitator superfamily transporter (AHRD V3.3 *** A0A0K0KFR2_CARHR)


Gene families : OG_42_0000520 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000520_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g055080
Cluster HCCA clusters: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
Bradi4g29110 No alias Major facilitator superfamily protein 0.05 Orthogroups_2024-Update
Bradi4g29140 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G078330.12 No alias UMF15-type solute transporter 0.04 Orthogroups_2024-Update
LOC_Os03g59450 No alias transporter-related, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g20520 No alias transporter-related, putative, expressed 0.03 Orthogroups_2024-Update
MA_75238g0010 No alias (at1g78130 : 145.0) unfertilized embryo sac 2 (UNE2);... 0.03 Orthogroups_2024-Update
Sobic.007G124400.1 No alias UMF15-type solute transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR011701 MFS 46 408
No external refs found!