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  5. Solyc04g070970

Solyc04g070970


Description : ABC transporter family protein (AHRD V3.3 *** B9IIG9_POPTR)


Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g070970
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Brara.B00211.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.B03187.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Brara.I02713.1 No alias cytokinin transporter *(ABCG14) & subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU4Hr1G072620.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
HORVU7Hr1G090350.3 No alias sporopollenin precursor exporter *(ABCG26) & subfamily... 0.03 Orthogroups_2024-Update
Potri.006G199500 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Seita.6G049400.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 471 680
IPR003439 ABC_transporter-like 155 304
No external refs found!