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  5. Solyc04g071750

Solyc04g071750


Description : Tubby-like F-box protein (AHRD V3.3 *** K4BTG5_SOLLC)


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g071750
Cluster HCCA clusters: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
At1g47270 No alias Tubby-like F-box protein 6... 0.02 Orthogroups_2024-Update
At1g53320 No alias Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9] 0.03 Orthogroups_2024-Update
GRMZM2G176340 No alias tubby like protein 2 0.02 Orthogroups_2024-Update
Glyma.07G147700 No alias tubby like protein 1 0.03 Orthogroups_2024-Update
Glyma.11G069400 No alias tubby like protein 2 0.02 Orthogroups_2024-Update
HORVU6Hr1G068970.3 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g48370 No alias OsFBT1 - F-box and tubby domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g01290 No alias OsFBT12 - F-box and tubby domain containing protein, expressed 0.02 Orthogroups_2024-Update
PSME_00035615-RA No alias (at2g47900 : 306.0) Member of TLP family; tubby like... 0.02 Orthogroups_2024-Update
Seita.2G422900.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Seita.3G180900.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G372000.1 No alias TUB-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000007 Tubby_C 117 190
IPR001810 F-box_dom 53 105
No external refs found!