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Description : LOW QUALITY:DNA-directed RNA polymerase subunit beta'' (AHRD V3.3 *-* RPOC2_SOLLC)
Gene families : OG_42_0001520 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001520_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc01g057100 | |
| Cluster | HCCA clusters: Cluster_295 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi1g39195 | No alias | DNA-directed RNA polymerase family protein | 0.03 | Orthogroups_2024-Update | |
| Solyc01g017420 | No alias | DNA-directed RNA polymerase subunit beta'' (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc01g017510 | No alias | LOW QUALITY:DNA-directed RNA polymerase subunit beta''... | 0.05 | Orthogroups_2024-Update | |
| Solyc11g007260 | No alias | LOW QUALITY:DNA-directed RNA polymerase subunit beta''... | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Predicted GO |
| BP | GO:0002682 | regulation of immune system process | IEP | Predicted GO |
| BP | GO:0002831 | regulation of response to biotic stimulus | IEP | Predicted GO |
| MF | GO:0004144 | diacylglycerol O-acyltransferase activity | IEP | Predicted GO |
| MF | GO:0005375 | copper ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| CC | GO:0005811 | lipid droplet | IEP | Predicted GO |
| BP | GO:0006825 | copper ion transport | IEP | Predicted GO |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Predicted GO |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Predicted GO |
| CC | GO:0009521 | photosystem | IEP | Predicted GO |
| BP | GO:0010112 | regulation of systemic acquired resistance | IEP | Predicted GO |
| CC | GO:0012511 | monolayer-surrounded lipid storage body | IEP | Predicted GO |
| MF | GO:0016168 | chlorophyll binding | IEP | Predicted GO |
| MF | GO:0016411 | acylglycerol O-acyltransferase activity | IEP | Predicted GO |
| BP | GO:0031347 | regulation of defense response | IEP | Predicted GO |
| BP | GO:0032101 | regulation of response to external stimulus | IEP | Predicted GO |
| BP | GO:0035434 | copper ion transmembrane transport | IEP | Predicted GO |
| BP | GO:0043900 | regulation of multi-organism process | IEP | Predicted GO |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Predicted GO |
| CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
| BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0045088 | regulation of innate immune response | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Predicted GO |
| BP | GO:0050776 | regulation of immune response | IEP | Predicted GO |
| BP | GO:0080134 | regulation of response to stress | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |