Solyc04g072000

Description : Chitinase (AHRD V3.3 *** A0A1B1HY32_9APIA)

Gene families : OG_42_0000525 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc04g072000
Cluster	HCCA clusters: Cluster_183

Target	Alias	Description	ECC score	Gene Family Method
426710	No alias	Chitinase family protein	0.03	Orthogroups_2024-Update
A4A49_35699	No alias	endochitinase ep3	0.04	Orthogroups_2024-Update
MA_10430424g0010	No alias	(p29022\|chia_maize : 207.0) Endochitinase A precursor...	0.03	Orthogroups_2024-Update
PSME_00037636-RA	No alias	(p29022\|chia_maize : 228.0) Endochitinase A precursor...	0.03	Orthogroups_2024-Update
PSME_00050467-RA	No alias	(at2g43590 : 220.0) Chitinase family protein; FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00050767-RA	No alias	(p29022\|chia_maize : 240.0) Endochitinase A precursor...	0.03	Orthogroups_2024-Update
Potri.013G125000	No alias	homolog of carrot EP3-3 chitinase	0.03	Orthogroups_2024-Update
Potri.019G093900	No alias	homolog of carrot EP3-3 chitinase	0.02	Orthogroups_2024-Update
Potri.019G094100	No alias	homolog of carrot EP3-3 chitinase	0.02	Orthogroups_2024-Update
Seita.7G150300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.7G150500.1	No alias	Unknown function	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	InterProScan predictions
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008061	chitin binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	InterProScan predictions
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0042737	drug catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0009055	electron transfer activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	77	276
IPR001002	Chitin-bd_1	30	59

External Links

No external refs found!

Solyc04g072000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation