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  5. Solyc04g072490

Solyc04g072490


Description : Epidermal patterning factor (AHRD V3.3 *** A0A072V8D7_MEDTR)


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g072490
Cluster HCCA clusters: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
Bradi3g04517 No alias Mitochondrial transcription termination factor family protein 0.03 Orthogroups_2024-Update
Bradi4g20547 No alias Mitochondrial transcription termination factor family protein 0.03 Orthogroups_2024-Update
Bradi4g23227 No alias Mitochondrial transcription termination factor family protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G056910.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
MA_205355g0010 No alias (at5g64950 : 101.0) Mitochondrial transcription... 0.03 Orthogroups_2024-Update
PSME_00000442-RA No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
PSME_00009256-RA No alias (at1g62110 : 82.4) Mitochondrial transcription... 0.05 Orthogroups_2024-Update
PSME_00020293-RA No alias (at5g23930 : 110.0) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
Seita.1G321500.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Seita.2G184700.1 No alias mTERF-type transcription factor 0.05 Orthogroups_2024-Update
Seita.4G092000.1 No alias mTERF-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.003G396100.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!