Description : 60S ribosomal protein L30 (AHRD V3.3 *** RL30_LUPLU)
Gene families : OG_42_0001724 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001724_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc04g072660 | |
Cluster | HCCA clusters: Cluster_55 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
19071 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.1 | Orthogroups_2024-Update | |
A4A49_02333 | No alias | 60s ribosomal protein l30-2 | 0.12 | Orthogroups_2024-Update | |
A4A49_19973 | No alias | 60s ribosomal protein l30-2 | 0.11 | Orthogroups_2024-Update | |
A4A49_60378 | No alias | 60s ribosomal protein l30-2 | 0.06 | Orthogroups_2024-Update | |
At3g18740 | No alias | 60S ribosomal protein L30-3... | 0.06 | Orthogroups_2024-Update | |
Bradi1g31460 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.07 | Orthogroups_2024-Update | |
Bradi2g10400 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.06 | Orthogroups_2024-Update | |
Bradi2g21770 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.06 | Orthogroups_2024-Update | |
Brara.A02913.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.15 | Orthogroups_2024-Update | |
Brara.C03701.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.13 | Orthogroups_2024-Update | |
Brara.E02321.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.14 | Orthogroups_2024-Update | |
Brara.G02123.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Brara.G03541.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Cre10.g420750 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.1 | Orthogroups_2024-Update | |
GRMZM2G044137 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.02G002300 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.11 | Orthogroups_2024-Update | |
Glyma.08G257100 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.08 | Orthogroups_2024-Update | |
Glyma.10G002400 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.13 | Orthogroups_2024-Update | |
Glyma.18G281200 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.06 | Orthogroups_2024-Update | |
HORVU3Hr1G038950.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
HORVU7Hr1G110660.2 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Kfl00019_0450 | kfl00019_0450_v1.1 | (o49884|rl30_luplu : 186.0) 60S ribosomal protein L30 -... | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g16890 | No alias | ribosomal protein L7Ae, putative, expressed | 0.07 | Orthogroups_2024-Update | |
LOC_Os01g59730 | No alias | ribosomal protein L7Ae, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os05g41110 | No alias | ribosomal protein L7Ae, putative, expressed | 0.04 | Orthogroups_2024-Update | |
MA_10431626g0010 | No alias | (o49884|rl30_luplu : 184.0) 60S ribosomal protein L30 -... | 0.04 | Orthogroups_2024-Update | |
MA_6354g0010 | No alias | (o49884|rl30_luplu : 204.0) 60S ribosomal protein L30 -... | 0.06 | Orthogroups_2024-Update | |
Mp7g01690.1 | No alias | component RPL30 of LSU proteome component | 0.06 | Orthogroups_2024-Update | |
PSME_00026808-RA | No alias | (o49884|rl30_luplu : 160.0) 60S ribosomal protein L30 -... | 0.07 | Orthogroups_2024-Update | |
PSME_00033349-RA | No alias | (o49884|rl30_luplu : 192.0) 60S ribosomal protein L30 -... | 0.06 | Orthogroups_2024-Update | |
Potri.004G196500 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.05 | Orthogroups_2024-Update | |
Potri.007G086800 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.06 | Orthogroups_2024-Update | |
Potri.009G158700 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.06 | Orthogroups_2024-Update | |
Pp1s106_167V6 | No alias | ribosomal protein l30 | 0.12 | Orthogroups_2024-Update | |
Pp1s13_391V6 | No alias | ribosomal protein l30 | 0.18 | Orthogroups_2024-Update | |
Pp1s41_251V6 | No alias | ribosomal protein l30 | 0.16 | Orthogroups_2024-Update | |
Pp1s50_55V6 | No alias | ribosomal protein l30 | 0.04 | Orthogroups_2024-Update | |
Pp1s91_111V6 | No alias | ribosomal protein l30 | 0.02 | Orthogroups_2024-Update | |
Seita.3G197300.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Seita.5G043000.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.009G179100.1 | No alias | component *(eL30) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
Solyc11g071490 | No alias | 60S ribosomal protein L30 (AHRD V3.3 *** RL30_LUPLU) | 0.09 | Orthogroups_2024-Update | |
Sopen01g004590 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.15 | Orthogroups_2024-Update | |
Sopen04g028860 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.06 | Orthogroups_2024-Update | |
Sopen11g029180 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 0.17 | Orthogroups_2024-Update | |
evm.model.contig_3502.5 | No alias | (q9sdg6|rl30_orysa : 151.0) 60S ribosomal protein L30 -... | 0.17 | Orthogroups_2024-Update | |
evm.model.tig00001164.6 | No alias | (o49884|rl30_luplu : 168.0) 60S ribosomal protein L30 -... | 0.14 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003735 | structural constituent of ribosome | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0004379 | glycylpeptide N-tetradecanoyltransferase activity | IEP | Predicted GO |
MF | GO:0004843 | thiol-dependent ubiquitin-specific protease activity | IEP | Predicted GO |
MF | GO:0005198 | structural molecule activity | IEP | Predicted GO |
MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Predicted GO |
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
CC | GO:0005742 | mitochondrial outer membrane translocase complex | IEP | Predicted GO |
CC | GO:0005840 | ribosome | IEP | Predicted GO |
BP | GO:0006412 | translation | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006518 | peptide metabolic process | IEP | Predicted GO |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0006839 | mitochondrial transport | IEP | Predicted GO |
BP | GO:0007005 | mitochondrion organization | IEP | Predicted GO |
BP | GO:0007006 | mitochondrial membrane organization | IEP | Predicted GO |
BP | GO:0007008 | outer mitochondrial membrane organization | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
BP | GO:0008150 | biological_process | IEP | Predicted GO |
BP | GO:0008152 | metabolic process | IEP | Predicted GO |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predicted GO |
BP | GO:0009058 | biosynthetic process | IEP | Predicted GO |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0009987 | cellular process | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
BP | GO:0017038 | protein import | IEP | Predicted GO |
MF | GO:0019107 | myristoyltransferase activity | IEP | Predicted GO |
BP | GO:0019538 | protein metabolic process | IEP | Predicted GO |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
CC | GO:0019867 | outer membrane | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predicted GO |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Predicted GO |
BP | GO:0043043 | peptide biosynthetic process | IEP | Predicted GO |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predicted GO |
CC | GO:0043226 | organelle | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
BP | GO:0043603 | cellular amide metabolic process | IEP | Predicted GO |
BP | GO:0043604 | amide biosynthetic process | IEP | Predicted GO |
BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
BP | GO:0044238 | primary metabolic process | IEP | Predicted GO |
BP | GO:0044249 | cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044267 | cellular protein metabolic process | IEP | Predicted GO |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0044444 | cytoplasmic part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044455 | mitochondrial membrane part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
BP | GO:0045040 | protein import into mitochondrial outer membrane | IEP | Predicted GO |
BP | GO:0061024 | membrane organization | IEP | Predicted GO |
BP | GO:0070585 | protein localization to mitochondrion | IEP | Predicted GO |
BP | GO:0071704 | organic substance metabolic process | IEP | Predicted GO |
BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Predicted GO |
BP | GO:0090151 | establishment of protein localization to mitochondrial membrane | IEP | Predicted GO |
CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
CC | GO:0098799 | outer mitochondrial membrane protein complex | IEP | Predicted GO |
CC | GO:0098805 | whole membrane | IEP | Predicted GO |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Predicted GO |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Predicted GO |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 31 | 93 |
No external refs found! |