Solyc04g072890

Description : Transducin/WD40 repeat protein (AHRD V3.3 *-* G8A379_MEDTR)

Gene families : OG_42_0000776 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000776_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc04g072890
Cluster	HCCA clusters: Cluster_243

Target	Alias	Description	ECC score	Gene Family Method
Brara.E02782.1	No alias	substrate adaptor of CUL4-based E3 ubiquitin ligase complex	0.03	Orthogroups_2024-Update
Brara.J01054.1	No alias	substrate adaptor of CUL4-based E3 ubiquitin ligase complex	0.03	Orthogroups_2024-Update
Kfl00164_0060	kfl00164_0060_v1.1	(at1g78070 : 478.0) Transducin/WD40 repeat-like...	0.02	Orthogroups_2024-Update
LOC_Os08g38880	No alias	WD-40 repeat family protein, putative, expressed	0.03	Orthogroups_2024-Update
Sobic.007G123900.1	No alias	substrate adaptor of CUL4-based E3 ubiquitin ligase complex	0.03	Orthogroups_2024-Update
evm.model.contig_4467.1	No alias	(at3g13340 : 276.0) Transducin/WD40 repeat-like...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0005488	binding	IEP	Predicted GO
MF	GO:0008234	cysteine-type peptidase activity	IEP	Predicted GO
BP	GO:0019725	cellular homeostasis	IEP	Predicted GO
BP	GO:0042592	homeostatic process	IEP	Predicted GO
BP	GO:0045454	cell redox homeostasis	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
BP	GO:0065008	regulation of biological quality	IEP	Predicted GO

No InterPro domains available for this sequence

External Links

No external refs found!