1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g076680

Solyc04g076680


No description available


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g076680
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Bradi2g30530 No alias AGAMOUS-like 23 0.02 Orthogroups_2024-Update
Bradi2g31084 No alias K-box region and MADS-box transcription factor family protein 0.06 Orthogroups_2024-Update
Bradi4g39420 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Brara.I00639.1 No alias regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.04 Orthogroups_2024-Update
Glyma.02G185500 No alias AGAMOUS-like 18 0.04 Orthogroups_2024-Update
Glyma.04G142550 No alias AGAMOUS-like 15 0.03 Orthogroups_2024-Update
Glyma.10G084800 No alias AGAMOUS-like 62 0.05 Orthogroups_2024-Update
Glyma.10G085900 No alias AGAMOUS-like 62 0.05 Orthogroups_2024-Update
LOC_Os02g45770 No alias OsMADS6 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g39130 No alias OsMADS56 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
Pp1s55_284V6 No alias mikc* mads-box transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!