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Description : Oligopeptide transporter, putative (AHRD V3.3 *** B9SMX8_RICCO)
Gene families : OG_42_0000467 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000467_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc04g076780 | |
| Cluster | HCCA clusters: Cluster_104 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_22968 | No alias | oligopeptide transporter 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.03G139100 | No alias | oligopeptide transporter 5 | 0.02 | Orthogroups_2024-Update | |
| Mp4g15510.1 | No alias | oligopeptide transporter (OPT) | 0.02 | Orthogroups_2024-Update | |
| Pp1s91_181V6 | No alias | oligopeptide transporter opt family | 0.02 | Orthogroups_2024-Update | |
| Sopen04g030510 | No alias | OPT oligopeptide transporter protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003872 | 6-phosphofructokinase activity | IEP | Predicted GO |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004797 | thymidine kinase activity | IEP | Predicted GO |
| CC | GO:0005730 | nucleolus | IEP | Predicted GO |
| BP | GO:0006479 | protein methylation | IEP | Predicted GO |
| BP | GO:0008213 | protein alkylation | IEP | Predicted GO |
| MF | GO:0008443 | phosphofructokinase activity | IEP | Predicted GO |
| MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
| BP | GO:0016073 | snRNA metabolic process | IEP | Predicted GO |
| BP | GO:0016180 | snRNA processing | IEP | Predicted GO |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Predicted GO |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
| MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Predicted GO |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Predicted GO |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
| MF | GO:0019206 | nucleoside kinase activity | IEP | Predicted GO |
| MF | GO:0019239 | deaminase activity | IEP | Predicted GO |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0034472 | snRNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0034477 | U6 snRNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
| BP | GO:0043628 | ncRNA 3'-end processing | IEP | Predicted GO |
| BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
| BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004813 | OPT | 45 | 717 |
| No external refs found! |