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  5. Solyc04g077980

Solyc04g077980


Description : C2H2-type zinc finger protein


Gene families : OG_42_0000046 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g077980
Cluster HCCA clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
A4A49_41461 No alias zinc finger protein zat10 0.02 Orthogroups_2024-Update
At3g10470 No alias C2H2-type zinc finger family protein... 0.02 Orthogroups_2024-Update
At5g04390 No alias C2H2-type zinc finger family protein... 0.05 Orthogroups_2024-Update
At5g56200 No alias C2H2 type zinc finger transcription factor family... 0.03 Orthogroups_2024-Update
At5g59820 No alias Zinc finger protein ZAT12... 0.03 Orthogroups_2024-Update
Brara.D02316.1 No alias C2H2-type subclass ZAT transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G140033 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
GRMZM2G361210 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Glyma.03G186000 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.04G164300 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
LOC_Os02g19180 No alias ZOS2-06 - C2H2 zinc finger protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os05g38620 No alias ZOS5-10 - C2H2 zinc finger protein, expressed 0.02 Orthogroups_2024-Update
MA_9316262g0010 No alias (at2g45120 : 86.3) C2H2-like zinc finger protein;... 0.02 Orthogroups_2024-Update
PSME_00025745-RA No alias (at2g45120 : 107.0) C2H2-like zinc finger protein;... 0.03 Orthogroups_2024-Update
PSME_00056418-RA No alias (at1g02040 : 111.0) C2H2-type zinc finger family... 0.02 Orthogroups_2024-Update
Potri.002G143600 No alias C2H2-type zinc finger family protein 0.02 Orthogroups_2024-Update
Potri.014G066200 No alias C2H2-type zinc finger family protein 0.03 Orthogroups_2024-Update
Solyc11g073060 No alias Zinc finger family protein (AHRD V3.3 *** B9HM54_POPTR) 0.03 Orthogroups_2024-Update
Solyc12g088390 No alias Zinc-finger protein (AHRD V3.3 *** Q40899_PETHY) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP Predicted GO
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0034311 diol metabolic process IEP Predicted GO
BP GO:0034312 diol biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0046146 tetrahydrobiopterin metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!