Solyc04g079080


Description : LOW QUALITY:Calcium-binding EF-hand (AHRD V3.3 *-* A0A103YCM4_CYNCS)


Gene families : OG_42_0001197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001197_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g079080
Cluster HCCA clusters: Cluster_162


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 115 141
IPR002048 EF_hand_dom 252 268
IPR002048 EF_hand_dom 32 81
IPR002048 EF_hand_dom 151 234
No external refs found!