Solyc04g079210


Description : Patatin (AHRD V3.3 *** A0A0V0I1U4_SOLCH)


Gene families : OG_42_0000167 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g079210
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Bradi3g37980 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
GRMZM2G349749 No alias phospholipase A 2A 0.03 Orthogroups_2024-Update
MA_10437194g0010 No alias (at4g37050 : 125.0) Patatin-related phospholipase A.... 0.02 Orthogroups_2024-Update
Solyc02g090490 No alias Patatin (AHRD V3.3 *** K4BCJ8_SOLLC) 0.02 Orthogroups_2024-Update
Sopen04g032820 No alias Patatin-like phospholipase 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!