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  5. Solyc04g079240

Solyc04g079240


Description : Patatin (AHRD V3.3 *** K4BV08_SOLLC)


Gene families : OG_42_0000167 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g079240
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
HORVU4Hr1G075070.7 No alias phospholipase-A2 *(pPLA2-II)) 0.03 Orthogroups_2024-Update
Kfl00097_0070 kfl00097_0070_v1.1 no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Kfl00121_0060 kfl00121_0060_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Solyc02g090490 No alias Patatin (AHRD V3.3 *** K4BCJ8_SOLLC) 0.03 Orthogroups_2024-Update
Sopen04g032850 No alias Patatin-like phospholipase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006665 sphingolipid metabolic process IEP Predicted GO
BP GO:0006672 ceramide metabolic process IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002641 PNPLA_dom 26 232
No external refs found!