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  5. Solyc04g079700

Solyc04g079700


Description : Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT2G26490.1)


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g079700
Cluster HCCA clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
At1g24530 No alias F21J9.19 [Source:UniProtKB/TrEMBL;Acc:Q9FYL1] 0.06 Orthogroups_2024-Update
Glyma.17G126000 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.002G130400 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.007G035100 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G109500 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G163600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc07g025140 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 190 220
IPR001680 WD40_repeat 319 351
IPR001680 WD40_repeat 225 261
IPR001680 WD40_repeat 359 405
No external refs found!