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  5. evm.model.tig00000241.79

evm.model.tig00000241.79


Description : (at3g55170 : 158.0) Ribosomal L29 family protein ; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29 (InterPro:IPR001854), Ribosomal protein L29, conserved site (InterPro:IPR018254); BEST Arabidopsis thaliana protein match is: Ribosomal L29 family protein (TAIR:AT3G09500.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l805|rl35_wheat : 137.0) 60S ribosomal protein L35 - Triticum aestivum (Wheat) & (reliability: 316.0) & (original description: no original description)


Gene families : OG_42_0001364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000241.79
Cluster HCCA clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
438324 No alias Ribosomal L29 family protein 0.17 Orthogroups_2024-Update
A4A49_28237 No alias 60s ribosomal protein l35-4 0.19 Orthogroups_2024-Update
A4A49_63512 No alias 60s ribosomal protein l35-4 0.13 Orthogroups_2024-Update
AC206642.4_FG001 No alias Ribosomal L29 family protein 0.09 Orthogroups_2024-Update
At2g39390 No alias 60S ribosomal protein L35-2... 0.02 Orthogroups_2024-Update
Bradi5g07170 No alias Ribosomal L29 family protein 0.09 Orthogroups_2024-Update
Brara.A03526.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Brara.B00059.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.C02014.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.C03268.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Brara.E03085.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.2 Orthogroups_2024-Update
Brara.J02866.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Cre14.g617900 No alias Ribosomal L29 family protein 0.28 Orthogroups_2024-Update
GRMZM2G043279 No alias Ribosomal L29 family protein 0.06 Orthogroups_2024-Update
Glyma.10G291500 No alias Ribosomal L29 family protein 0.17 Orthogroups_2024-Update
Glyma.13G133900 No alias Ribosomal L29 family protein 0.07 Orthogroups_2024-Update
Glyma.13G331900 No alias Ribosomal L29 family protein 0.02 Orthogroups_2024-Update
Glyma.20G240700 No alias Ribosomal L29 family protein 0.16 Orthogroups_2024-Update
HORVU2Hr1G068120.2 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Kfl00608_0050 kfl00608_0050_v1.1 (at5g02610 : 177.0) Ribosomal L29 family protein ;... 0.07 Orthogroups_2024-Update
LOC_Os02g30050 No alias ribosomal protein L29, putative, expressed 0.03 Orthogroups_2024-Update
MA_10429159g0020 No alias (at5g02610 : 210.0) Ribosomal L29 family protein ;... 0.1 Orthogroups_2024-Update
Mp6g05620.1 No alias component RPL35 of LSU proteome component 0.13 Orthogroups_2024-Update
PSME_00020825-RA No alias (at5g02610 : 157.0) Ribosomal L29 family protein ;... 0.16 Orthogroups_2024-Update
PSME_00033304-RA No alias (at5g02610 : 177.0) Ribosomal L29 family protein ;... 0.06 Orthogroups_2024-Update
Potri.006G214200 No alias Ribosomal L29 family protein 0.05 Orthogroups_2024-Update
Potri.008G048800 No alias Ribosomal L29 family protein 0.06 Orthogroups_2024-Update
Potri.010G212300 No alias Ribosomal L29 family protein 0.1 Orthogroups_2024-Update
Pp1s102_67V6 No alias 60s ribosomal protein l35 0.14 Orthogroups_2024-Update
Pp1s133_93V6 No alias 60s ribosomal protein l35 0.26 Orthogroups_2024-Update
Pp1s1_489V6 No alias 60s ribosomal protein l35 0.29 Orthogroups_2024-Update
Seita.1G166300.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Seita.7G064700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Sobic.004G152400.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.15 Orthogroups_2024-Update
Sobic.004G152700.1 No alias component *(uL29) of large ribosomal-subunit (LSU) proteome 0.23 Orthogroups_2024-Update
Solyc04g010240 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.17 Orthogroups_2024-Update
Solyc05g054810 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.18 Orthogroups_2024-Update
Solyc06g075620 No alias 60S ribosomal protein L35 (AHRD V3.3 *** RL35_EUPES) 0.04 Orthogroups_2024-Update
Sopen04g005430 No alias Ribosomal L29 protein 0.1 Orthogroups_2024-Update
Sopen05g033280 No alias Ribosomal L29 protein 0.18 Orthogroups_2024-Update
evm.model.contig_654.2 No alias (at5g02610 : 134.0) Ribosomal L29 family protein ;... 0.26 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 63
No external refs found!