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  5. evm.model.tig00000254.95

evm.model.tig00000254.95


Description : (q9ld46|crd1_chlre : 392.0) Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1, chloroplast precursor (EC 1.14.13.81) (Mg-protoporphyrin IX monomethyl ester oxidative cyclase 1) (Copper response defect 1 protein) (Copper-response target 1 protein) & (at3g56940 : 375.0) Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site.; COPPER RESPONSE DEFECT 1 (CRD1); FUNCTIONS IN: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity, DNA binding; INVOLVED IN: chlorophyll biosynthetic process, oxidation reduction, photosynthesis; LOCATED IN: chloroplast thylakoid membrane, chloroplast inner membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase (InterPro:IPR008434), Ferritin/ribonucleotide reductase-like (InterPro:IPR009078), Rubrerythrin (InterPro:IPR003251). & (reliability: 750.0) & (original description: no original description)


Gene families : OG_42_0005006 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005006_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000254.95
Cluster HCCA clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Kfl00059_0280 kfl00059_0280_v1.1 (at3g56940 : 584.0) Encodes a putative ZIP protein with... 0.02 Orthogroups_2024-Update
LOC_Os01g17170 No alias magnesium-protoporphyrin IX monomethyl ester... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003251 Rubrerythrin 129 262
No external refs found!