Solyc04g080810

Description : Cytokinin oxidase/dehydrogenase-like (AHRD V3.3 *-* I0IUQ7_SOLLC)

Gene families : OG_42_0002163 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002163_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc04g080810
Cluster	HCCA clusters: Cluster_151

Target	Alias	Description	ECC score	Gene Family Method
Bradi4g00660	No alias	ubiquitin-conjugating enzyme 18	0.03	Orthogroups_2024-Update
GRMZM2G007381	No alias	Ubiquitin-conjugating enzyme family protein	0.03	Orthogroups_2024-Update
GRMZM2G018447	No alias	Ubiquitin-conjugating enzyme family protein	0.03	Orthogroups_2024-Update
Seita.3G405200.1	No alias	E2 ubiquitin-conjugating enzyme *(UBC15)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009690	cytokinin metabolic process	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	InterProScan predictions
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	None	Extended
MF	GO:0019139	cytokinin dehydrogenase activity	IEA	InterProScan predictions
BP	GO:0034754	cellular hormone metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	InterProScan predictions
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Predicted GO
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predicted GO
MF	GO:0003924	GTPase activity	IEP	Predicted GO
MF	GO:0004871	obsolete signal transducer activity	IEP	Predicted GO
BP	GO:0006887	exocytosis	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predicted GO
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Predicted GO
BP	GO:0032940	secretion by cell	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
CC	GO:0044448	cell cortex part	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
BP	GO:0046903	secretion	IEP	Predicted GO
CC	GO:0099023	tethering complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	58	191
IPR015345	Cytokinin_DH_FAD/cytokin-bd	183	259
IPR000608	UBQ-conjugat_E2	283	418

External Links

No external refs found!

Solyc04g080810

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation