evm.model.tig00000269.24

Description : (at3g06680 : 86.3) Ribosomal L29e protein family; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L29e (InterPro:IPR002673); BEST Arabidopsis thaliana protein match is: Ribosomal L29e protein family (TAIR:AT3G06700.3). & (reliability: 172.6) & (original description: no original description)

Gene families : OG_42_0003521 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003521_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Cyanophora release: evm.model.tig00000269.24
Cluster	HCCA clusters: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
228166	No alias	Ribosomal L29e protein family	0.02	Orthogroups_2024-Update
A4A49_53313	No alias	60s ribosomal protein l29-2	0.06	Orthogroups_2024-Update
At3g06680	No alias	60S ribosomal protein L29 [Source:UniProtKB/TrEMBL;Acc:F4JC32]	0.04	Orthogroups_2024-Update
Bradi4g24635	No alias	Ribosomal L29e protein family	0.02	Orthogroups_2024-Update
Brara.E03260.1	No alias	component *(eL29) of large ribosomal-subunit (LSU) proteome	0.02	Orthogroups_2024-Update
Cre03.g207050	No alias	Ribosomal L29e protein family	0.1	Orthogroups_2024-Update
Glyma.07G241700	No alias	Ribosomal L29e protein family	0.02	Orthogroups_2024-Update
HORVU1Hr1G059570.2	No alias	component *(eL29) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
MA_10433318g0010	No alias	no hits & (original description: no original description)	0.06	Orthogroups_2024-Update
PSME_00015658-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
Potri.002G196800	No alias	Ribosomal L29e protein family	0.04	Orthogroups_2024-Update
Potri.008G107700	No alias	Ribosomal L29e protein family	0.04	Orthogroups_2024-Update
Potri.010G142001	No alias	Ribosomal L29e protein family	0.06	Orthogroups_2024-Update
Pp1s28_307V6	No alias	60s ribosomal protein l29	0.14	Orthogroups_2024-Update
Pp1s58_102V6	No alias	60s ribosomal protein l29	0.09	Orthogroups_2024-Update
Pp1s79_253V6	No alias	60s ribosomal protein l29	0.13	Orthogroups_2024-Update
Solyc05g053440	No alias	60S ribosomal protein L29, putative (AHRD V3.3 *** B9RZN1_RICCO)	0.11	Orthogroups_2024-Update
Sopen11g022530	No alias	Ribosomal L29e protein family	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Predicted GO
MF	GO:0004222	metalloendopeptidase activity	IEP	Predicted GO
BP	GO:0006605	protein targeting	IEP	Predicted GO
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002673	Ribosomal_L29e	22	61

External Links

No external refs found!

evm.model.tig00000269.24

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation