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  5. Solyc04g080850

Solyc04g080850


Description : Thioredoxin (AHRD V3.3 *** Q201Z4_9SOLN)


Gene families : OG_42_0000297 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g080850
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
At1g19730 No alias Thioredoxin H4 [Source:UniProtKB/Swiss-Prot;Acc:Q39239] 0.03 Orthogroups_2024-Update
At1g45145 No alias Thioredoxin H5 [Source:UniProtKB/Swiss-Prot;Acc:Q39241] 0.03 Orthogroups_2024-Update
Brara.I01605.1 No alias H-type thioredoxin *(Trx-H) 0.03 Orthogroups_2024-Update
Glyma.09G273200 No alias thioredoxin H-type 9 0.02 Orthogroups_2024-Update
LOC_Os05g07690 No alias thioredoxin, putative, expressed 0.02 Orthogroups_2024-Update
MA_10434223g0010 No alias (q43636|trxh_ricco : 111.0) Thioredoxin H-type (TRX-H) -... 0.03 Orthogroups_2024-Update
Seita.9G051600.1 No alias H-type thioredoxin *(Trx-H) 0.02 Orthogroups_2024-Update
Sobic.001G052900.1 No alias H-type thioredoxin *(Trx-H) 0.03 Orthogroups_2024-Update
Solyc05g006850 No alias Thioredoxin family protein (AHRD V3.3 *** B9IJS4_POPTR) 0.03 Orthogroups_2024-Update
Sopen02g032380 No alias Thioredoxin 0.02 Orthogroups_2024-Update
evm.model.tig00020801.99 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 14 114
No external refs found!