1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc04g080930

Solyc04g080930


Description : RING/U-box superfamily protein (AHRD V3.3 *-* AT2G42030.1)


Gene families : OG_42_0007740 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007740_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g080930
Cluster HCCA clusters: Cluster_97


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0008440 inositol-1,4,5-trisphosphate 3-kinase activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0051766 inositol trisphosphate kinase activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0098599 palmitoyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006845 Pex_N 46 288
IPR001841 Znf_RING 350 389
No external refs found!