- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc04g081240 | |
| Cluster | HCCA clusters: Cluster_30 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi2g46190 | No alias | Transcriptional factor B3 family protein /... | 0.02 | Orthogroups_2024-Update | |
| Bradi3g04920 | No alias | auxin response factor 6 | 0.02 | Orthogroups_2024-Update | |
| Bradi3g49320 | No alias | auxin response factor 16 | 0.03 | Orthogroups_2024-Update | |
| Bradi5g25157 | No alias | Transcriptional factor B3 family protein /... | 0.03 | Orthogroups_2024-Update | |
| Brara.D00084.1 | No alias | ARF-type transcription factor | 0.04 | Orthogroups_2024-Update | |
| Brara.F01355.1 | No alias | ARF-type transcription factor & auxin signal mediator... | 0.04 | Orthogroups_2024-Update | |
| Brara.G02608.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Brara.I02823.1 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G702026 | No alias | auxin response factor 1 | 0.03 | Orthogroups_2024-Update | |
| Glyma.11G204200 | No alias | auxin response factor 8 | 0.03 | Orthogroups_2024-Update | |
| Glyma.13G140600 | No alias | auxin response factor 16 | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G109650.18 | No alias | ARF-type transcription factor | 0.03 | Orthogroups_2024-Update | |
| Mp1g12750.1 | No alias | transcription factor (ARF) | 0.02 | Orthogroups_2024-Update | |
| Mp4g11820.1 | No alias | transcription factor (ARF) | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000796 | condensin complex | IEP | Predicted GO |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
| BP | GO:0006323 | DNA packaging | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0007059 | chromosome segregation | IEP | Predicted GO |
| BP | GO:0007076 | mitotic chromosome condensation | IEP | Predicted GO |
| MF | GO:0008026 | ATP-dependent helicase activity | IEP | Predicted GO |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0022402 | cell cycle process | IEP | Predicted GO |
| BP | GO:0030261 | chromosome condensation | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Predicted GO |
| MF | GO:0043140 | ATP-dependent 3'-5' DNA helicase activity | IEP | Predicted GO |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
| BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
| BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0051301 | cell division | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0065007 | biological regulation | IEP | Predicted GO |
| MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Predicted GO |
| BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
| BP | GO:1903047 | mitotic cell cycle process | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |