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  5. Solyc04g081490

Solyc04g081490


Description : beta-tubulin


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g081490
Cluster HCCA clusters: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
A4A49_07023 No alias tubulin beta-2 chain 0.03 Orthogroups_2024-Update
AC234515.1_FG003 No alias tubulin beta 8 0.03 Orthogroups_2024-Update
Brara.K01811.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.04G023900 No alias tubulin beta-1 chain 0.05 Orthogroups_2024-Update
Glyma.05G207500 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Glyma.06G024100 No alias tubulin beta-1 chain 0.03 Orthogroups_2024-Update
LOC_Os01g59150 No alias tubulin/FtsZ domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Potri.006G035400 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Potri.016G033200 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Sopen04g035100 No alias Tubulin/FtsZ family, GTPase domain 0.07 Orthogroups_2024-Update
Sopen10g036160 No alias Tubulin/FtsZ family, GTPase domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 264 384
IPR003008 Tubulin_FtsZ_GTPase 3 214
No external refs found!