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  5. Solyc01g057890

Solyc01g057890


No description available


Gene families : OG_42_0000103 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g057890
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Brara.D00869.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F02960.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os01g22070 No alias transposon protein, putative, Mutator sub-class, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g35790 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os06g28990 No alias transposon protein, putative, Mutator sub-class, expressed 0.03 Orthogroups_2024-Update
Solyc03g095400 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g051280 No alias No description available 0.04 Orthogroups_2024-Update
Solyc10g049960 No alias No description available 0.04 Orthogroups_2024-Update
Sopen04g016440 No alias MULE transposase domain 0.03 Orthogroups_2024-Update
Sopen10g022230 No alias MULE transposase domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!