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  5. evm.model.tig00000383.45

evm.model.tig00000383.45


Description : (at5g14960 : 101.0) DP-E2F-like 2 (DEL2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: DP-E2F-like protein 3 (TAIR:AT3G01330.1); Has 936 Blast hits to 860 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 583; Fungi - 5; Plants - 220; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink). & (reliability: 202.0) & (original description: no original description)


Gene families : OG_42_0002758 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002758_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000383.45
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Kfl00334_0090 kfl00334_0090_v1.1 (at3g48160 : 187.0) E2F-like protein, an inhibitor of... 0.01 Orthogroups_2024-Update
MA_2814g0010 No alias (at3g48160 : 246.0) E2F-like protein, an inhibitor of... 0.02 Orthogroups_2024-Update
PSME_00032403-RA No alias (at3g48160 : 164.0) E2F-like protein, an inhibitor of... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
CC GO:0005667 transcription factor complex IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003316 E2F_WHTH_DNA-bd_dom 93 157
IPR003316 E2F_WHTH_DNA-bd_dom 238 318
No external refs found!