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  5. Solyc04g081980

Solyc04g081980


Description : LOW QUALITY:F-Box protein, putative (AHRD V3.3 *-* Q6L3W3_SOLDE)


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g081980
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
A4A49_06926 No alias putative f-box protein 0.02 Orthogroups_2024-Update
A4A49_14296 No alias f-boxkelch-repeat protein 0.02 Orthogroups_2024-Update
Glyma.05G071700 No alias F-box family protein 0.02 Orthogroups_2024-Update
Glyma.08G352700 No alias F-box family protein 0.04 Orthogroups_2024-Update
Glyma.13G114400 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Glyma.13G211000 No alias F-box and associated interaction domains-containing protein 0.05 Orthogroups_2024-Update
Glyma.15G101600 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Glyma.18G168300 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Glyma.18G168400 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Sopen09g001690 No alias F-box domain 0.03 Orthogroups_2024-Update
Sopen11g006650 No alias F-box domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0019829 cation-transporting ATPase activity IEP Predicted GO
MF GO:0022853 active ion transmembrane transporter activity IEP Predicted GO
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predicted GO
MF GO:0036442 proton-exporting ATPase activity IEP Predicted GO
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Predicted GO
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predicted GO
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 31 68
No external refs found!