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  5. Solyc04g082160

Solyc04g082160


Description : Ubiquitin family protein (AHRD V3.3 *** D7MTI3_ARALL)


Gene families : OG_42_0008208 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g082160
Cluster HCCA clusters: Cluster_142


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0005199 structural constituent of cell wall IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0009664 plant-type cell wall organization IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 103 148
No external refs found!